Positions

Selected Publications

Academic Article

Year Title Altmetric
2020 Molecular insight for the role of key residues of calreticulin in its binding activities: A computational study 2020
2020 Molecular insights into the effect of an apoptotic raft-like bilayer on the conformation and dynamics of calreticulin 2020
2018 Calmodulin antagonist enhances DR5-mediated apoptotic signaling in TRA-8 resistant triple negative breast cancer cellsJournal of Cellular Biochemistry.  119:6216-6230. 2018
2016 Characterization of the interactions between calmodulin and death receptor 5 in triple-negative and estrogen receptor-positive breast cancer cells: An integrated experimental and computational studyJournal of Biological Chemistry.  291:12862-12870. 2016
2014 Molecular insight into the effect of lipid bilayer environments on thrombospondin-1 and calreticulin interactionsBiochemistry.  53:6309-6322. 2014
2014 Characterization of calmodulin-fas death domain interaction: An integrated experimental and computational studyBiochemistry.  53:2680-2688. 2014
2011 Molecular and structural insight into the role of key residues of thrombospondin-1 and calreticulin in thrombospondin-1-calreticulin bindingBiochemistry.  50:566-573. 2011
2010 Role of altered sialylation of the i-like domain of β1 integrin in the binding of fibronectin to β1 integrin: Thermodynamics and conformational analysesBiophysical Journal.  99:208-217. 2010
2010 Structural insight into the role of thrombospondin-1 binding to calreticulin in calreticulin-induced focal adhesion disassemblyBiochemistry.  49:3685-3694. 2010
2010 Amiloride docking to acid-sensing ion channel-1Journal of Biological Chemistry.  285:9627-9635. 2010
2009 Psalmotoxin-1 docking to human acid-sensing ion channel-1Journal of Biological Chemistry.  284:17625-17633. 2009
2008 Conformation and free energy analyses of the complex of calcium-bound calmodulin and the Fas death domainBiophysical Journal.  95:5913-5921. 2008
2008 Molecular dynamics simulations of asymmetric NaCI and KCl solutions separated by phosphatidylcholine bilayers: Potential drops and structural changes induced by strong Na+-lipid interactions and finite size effectsBiophysical Journal.  94:3565-3576. 2008
2005 Molecular dynamics simulations of salicylate effects on the micro- and mesoscopic properties of a dipalmitoylphosphatidylcholine bilayer.Biochemistry.  44:13425-13438. 2005
2004 A three-dimensional finite element model of the human anterior cruciate ligament: A computational analysis with experimental validationJournal of Biomechanics.  37:383-390. 2004
2004 Continuum diffusion reaction rate calculations of wild-type and mutant mouse acetylcholinesterase: Adaptive finite element analysisBiophysical Journal.  87:1558-1566. 2004
2004 Finite Element Solution of the Steady-State Smoluchowski Equation for Rate Constant CalculationsBiophysical Journal.  86:2017-2029. 2004
2001 Three dimensional non-linear coupled thermo-mechanical FEM analysis of the dimensional accuracy for casting dies in rapid toolingFinite Elements in Analysis and Design.  38:79-91. 2001

Teaching Activities

  • BME780 - Biomolecular Modeling (Fall Term 2020) 2020
  • BME798 - Non-Dissertation Research (Fall Term 2020) 2020
  • BME698 - Non-Thesis Research (Summer Term 2020) 2020
  • BME333 - Biomechanics of Solids (Spring Term 2020) 2020
  • BME698 - Non-Thesis Research (Spring Term 2020) 2020
  • BME780 - Biomolecular Modeling (Fall Term 2019) 2019
  • BME333 - Biomechanics of Solids (Spring Term 2019) 2019
  • BME780 - Biomolecular Modeling (Fall Term 2018) 2018
  • BME798 - Non-Dissertation Research (Summer Term 2018) 2018
  • BME333 - Biomechanics of Solids (Spring Term 2018) 2018
  • BME780 - Biomolecular Modeling (Fall Term 2017) 2017
  • BME798 - Non-Dissertation Research (Fall Term 2017) 2017
  • BME799 - Dissertation Research (Fall Term 2017) 2017
  • BME799 - Dissertation Research (Summer Term 2017) 2017
  • BME333 - Biomechanics of Solids (Spring Term 2017) 2017
  • BME798 - Non-Dissertation Research (Spring Term 2017) 2017
  • BME799 - Dissertation Research (Spring Term 2017) 2017
  • BME690 - Special Topics in (Area) (Fall Term 2016) 2016
  • BME790 - Special Topics in (Area) (Fall Term 2016) 2016
  • BME798 - Non-Dissertation Research (Fall Term 2016) 2016
  • BME799 - Dissertation Research (Fall Term 2016) 2016
  • BME799 - Dissertation Research (Summer Term 2016) 2016
  • BME333 - Biomechanics of Solids (Spring Term 2016) 2016
  • BME799 - Dissertation Research (Spring Term 2016) 2016
  • BME690 - Special Topics in (Area) (Fall Term 2015) 2015
  • BME798 - Non-Dissertation Research (Fall Term 2015) 2015
  • BME798 - Non-Dissertation Research (Summer Term 2015) 2015
  • BME333 - Biomechanics of Solids (Spring Term 2015) 2015
  • BME798 - Non-Dissertation Research (Spring Term 2015) 2015
  • BME798 - Non-Dissertation Research (Fall Term 2014) 2014
  • BME798 - Non-Dissertation Research (Summer Term 2014) 2014
  • BME333 - Biomechanics of Solids (Spring Term 2014) 2014
  • BME798 - Non-Dissertation Research (Spring Term 2014) 2014
  • BME150 - Computer Meth in EGR (Fall Term 2013) 2013
  • BME798 - Non-Dissertation Research (Fall Term 2013) 2013
  • BME699 - Masters Thesis Research (Summer Term 2013) 2013
  • BME333 - Biomechanics of Solids (Spring Term 2013) 2013
  • BME699 - Masters Thesis Research (Spring Term 2013) 2013
  • BME698 - Non-Thesis Research (Fall Term 2012) 2012
  • BME699 - Masters Thesis Research (Fall Term 2012) 2012
  • BME698 - Non-Thesis Research (Summer Term 2012) 2012
  • BME333 - Biomechanics of Solids (Spring Term 2012) 2012
  • BME698 - Non-Thesis Research (Spring Term 2012) 2012
  • BME698 - Non-Thesis Research (Fall Term 2011) 2011
  • BME698 - Non-Thesis Research (Summer Term 2011) 2011
  • BME333 - Biomechanics of Solids (Spring Term 2011) 2011
  • BME490 - Special Topic in BME (Spring Term 2011) 2011
  • BME698 - Non-Thesis Research (Spring Term 2011) 2011
  • BME698 - Non-Thesis Research (Fall Term 2010) 2010
  • BME698 - Non-Thesis Research (Summer Term 2010) 2010
  • BME333 - Biomechanics of Solids (Spring Term 2010) 2010
  • BME698 - Non-Thesis Research (Spring Term 2010) 2010
  • BME580 - Biomolecular Modelling (Fall Term 2009) 2009
  • BME698 - Non-Thesis Research (Fall Term 2009) 2009
  • BME698 - Non-Thesis Research (Summer Term 2009) 2009
  • BME699 - Masters Thesis Research (Summer Term 2009) 2009
  • BME333 - Biomechanics of Solids (Spring Term 2009) 2009
  • BME698 - Non-Thesis Research (Spring Term 2009) 2009
  • BME698 - Non-Thesis Research (Fall Term 2008) 2008
  • BME698 - Non-Thesis Research (Summer Term 2008) 2008
  • BME333 - Biomechanics of Solids (Spring Term 2008) 2008
  • BME698 - Non-Thesis Research (Spring Term 2008) 2008
  • BME480 - Biomolecular Modelling (Fall Term 2007) 2007
  • BME580 - Biomolecular Modelling (Fall Term 2007) 2007
  • BME698 - Non-Thesis Research (Fall Term 2007) 2007
  • Education And Training

  • Doctor of Philosophy in Materials Engineering, Harbin Institute of Technology 1998
  • Master of Science in Materials Engineering, Harbin University of Science and Technology 1996
  • Bachelor of Science or Mathematics in Materials Engineering, Jilin University 1989
  • Full Name

  • Yuhua Song