Selected Publications

Academic Article

Year Title Altmetric
2018 CUILESS2016: A clinical corpus applying compositional normalization of text mentionsJournal of Biomedical Semantics.  9. 2018
2018 Phenotype Detection Registry System (PheDRS) - Implementation of a Generalizable Single Institution Clinical Registry ArchitectureAMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium.  2018:847-856. 2018
2016 Efficient identification of nationally mandated reportable cancer cases using natural language processing and machine learningJournal of the American Medical Informatics Association.  23:1077-1084. 2016
2015 Comparative genome analysis of Mycoplasma pneumoniaeBMC Genomics.  16. 2015
2014 Draft genome sequence of Hymenobacter sp. strain IS2118, isolated from a freshwater lake in Schirmacher Oasis, Antarctica, reveals diverse genes for adaptation to cold ecosystemsGenome Announcements.  2. 2014
2009 Annotating the human genome with Disease OntologyBMC Genomics.  10. 2009
2007 OBO-Edit - An ontology editor for biologistsBioinformatics.  23:2198-2200. 2007
2007 GeneChip resequencing of the smallpox virus genome can identify novel strains: A biodefense applicationJournal of Clinical Microbiology.  45:358-363. 2007
2002 Poxvirus Orthologous Clusters (POCs)Bioinformatics.  18:1544-1545. 2002
1992 Assessing the five-factor model of personality description.Journal of Personality.  60:253-293. 1992

Education And Training

  • Doctor of Philosophy in Computer and Information Sciences, University of Alabama at Birmingham 2016
  • Master's Level Degree in Genetics, University of Alberta 1998
  • Bachelor's Level Degree in Computer Science, University of Alberta 1994
  • Full Name

  • John Osborne