| Year |
Title |
Altmetric |
| 2021
|
Guest Editorial for Selected Papers from BIOKDD 2019.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
18:809-810.
2021
|
|
| 2021
|
Scalable de Novo Genome Assembly Using a Pregel-Like Graph-Parallel System.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
18:731-744.
2021
|
|
| 2021
|
Linking clinotypes to phenotypes and genotypes from laboratory test results in comprehensive physical exams.
BMC Medical Informatics and Decision Making.
21.
2021
|
|
| 2021
|
PAGER-CoV: A comprehensive collection of pathways, annotated gene-lists and gene signatures for coronavirus disease studies.
Nucleic Acids Research.
49:D589-D599.
2021
|
|
| 2021
|
Metabolic alterations mediated by STAT3 promotes drug persistence in CML.
Leukemia.
2021
|
|
| 2020
|
Guest Editorial for Selected Papers from BIOKDD 2018 and DMBIH 2018.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
17:1832-1834.
2020
|
|
| 2020
|
Design and fabrication of integrated magnetic field sensing system with enhanced sensitivity.
Journal of Magnetism and Magnetic Materials.
511.
2020
|
|
| 2020
|
Decoding sars-cov-2 hijacking of host mitochondria in covid-19 pathogenesis
2020
|
|
| 2020
|
IL-23 promotes a coordinated B cell germinal center program for class-switch recombination to IgG2b in BXD2 mice.
Journal of Immunology.
205:346-358.
2020
|
|
| 2020
|
Identifying the key regulators that promote cell-cycle activity in the hearts of early neonatal pigs after myocardial injury.
PLoS ONE.
15.
2020
|
|
| 2020
|
Erratum: Association of CMV genomic mutations with symptomatic infection and hearing loss in congenital CMV infection (BMC Infectious Diseases (2019) 19 (1046) DOI: 10.1186/s12879-019-4681-0).
BMC Infectious Diseases.
20.
2020
|
|
| 2019
|
Association of CMV genomic mutations with symptomatic infection and hearing loss in congenital CMV infection.
BMC Infectious Diseases.
19.
2019
|
|
| 2019
|
WIPER: Weighted in-Path Edge Ranking for biomolecular association networks
2019
|
|
| 2019
|
Coordinate regulation of cholesterol and bile acid metabolism by the clock modifier nobiletin in metabolically challenged old mice.
International Journal of Molecular Sciences.
20.
2019
|
|
| 2019
|
BEERE: a web server for biomedical entity expansion, ranking and explorations.
Nucleic Acids Research.
47:W578-W586.
2019
|
|
| 2019
|
Temporal Control of Appetite by AgRP Clocks.
Cell Metabolism.
29:1022-1023.
2019
|
|
| 2019
|
Central adiponectin induces trabecular bone mass partly through epigenetic downregulation of cannabinoid receptor CB1.
Journal of Cellular Physiology.
234:7062-7069.
2019
|
|
| 2019
|
Room-temperature spin-to-charge conversion in sputtered bismuth selenide thin films via spin pumping from yttrium iron garnet.
Applied Physics Letters.
114.
2019
|
|
| 2019
|
An Adiponectin Receptor Agonist Reduces Type 2 Diabetic Periodontitis.
Journal of Dental Research.
98:313-321.
2019
|
|
| 2019
|
Rosiglitazone reverses high fat diet-induced changes in BMAL1 function in muscle, fat, and liver tissue in mice.
International Journal of Obesity.
43:567-580.
2019
|
|
| 2019
|
Tissue-specific BMAL1 cistromes reveal that rhythmic transcription is associated with rhythmic enhancer–enhancer interactions.
Genes and Development.
33:294-309.
2019
|
|
| 2019
|
Gsslasso Cox: A Bayesian hierarchical model for predicting survival and detecting associated genes by incorporating pathway information.
BMC Bioinformatics.
20.
2019
|
|
| 2019
|
A systematic simulation-based meta-analytical framework for prediction of physiological biomarkers in alopecia.
Journal of Biological Research.
26.
2019
|
|
| 2019
|
Emerging relevance of circadian rhythms in headaches and neuropathic pain
2019
|
|
| 2019
|
Ghrelin receptor in agouti-related peptide neurones regulates metabolic adaptation to calorie restriction.
Journal of Neuroendocrinology.
31.
2019
|
|
| 2018
|
Multiscale and Multimodal Analysis for Computational Biology.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
15:1951-1952.
2018
|
|
| 2018
|
Super Gene Set Causal Relationship Discovery from Functional Genomics Data.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
15:1991-1998.
2018
|
|
| 2018
|
A novel Lipidoid-MicroRNA formulation promotes calvarial bone regeneration.
Biomaterials.
177:88-97.
2018
|
|
| 2018
|
Cluster headache is in part a disorder of the circadian system.
JAMA Neurology.
75:783-784.
2018
|
|
| 2018
|
Enhancement of tunneling magnetoresistance by inserting a diffusion barrier in L10-FePd perpendicular magnetic tunnel junctions.
Applied Physics Letters.
112.
2018
|
|
| 2018
|
Comprehensive characterization of alternative polyadenylation in human cancer
2018
|
|
| 2018
|
MicroRNA-99a is a novel regulator of KDM6B-mediated osteogenic differentiation of BMSCs.
Journal of Cellular and Molecular Medicine.
22:2162-2176.
2018
|
|
| 2018
|
The Genomic Landscape and Pharmacogenomic Interactions of Clock Genes in Cancer Chronotherapy.
Cell Systems.
6:314-328.e2.
2018
|
|
| 2018
|
Weak antilocalization and low-temperature characterization of sputtered polycrystalline bismuth selenide.
Applied Physics Letters.
112.
2018
|
|
| 2018
|
Simulation study of cDNA dataset to investigate possible association of differentially expressed genes of human THP1-monocytic cells in cancer progression affected by bacterial shiga toxins.
Frontiers in Microbiology.
9.
2018
|
|
| 2018
|
Mapping strain with magnetics
2018
|
|
| 2018
|
Development and Therapeutic Potential of Small-Molecule Modulators of Circadian Systems
2018
|
|
| 2018
|
PAGER 2.0: An update to the pathway, annotated-list and gene-signature electronic repository for Human Network Biology.
Nucleic Acids Research.
46:D668-D676.
2018
|
|
| 2018
|
Regenerative potential of neonatal porcine hearts.
Circulation.
138:2809-2816.
2018
|
|
| 2017
|
Repositioning drugs by targeting network modules: A Parkinson's disease case study.
BMC Bioinformatics.
18.
2017
|
|
| 2017
|
What’s next for chronobiology and drug discovery.
Expert Opinion on Drug Discovery.
12:1181-1185.
2017
|
|
| 2017
|
Myricetin improves endurance capacity and mitochondrial density by activating SIRT1 and PGC-1α.
Scientific Reports.
7.
2017
|
|
| 2017
|
Overexpression of MiR-335-5p Promotes Bone Formation and Regeneration in Mice.
Journal of Bone and Mineral Research.
32:2466-2475.
2017
|
|
| 2017
|
Period2 3′-UTR and microRNA-24 regulate circadian rhythms by repressing PERIOD2 protein accumulation
2017
|
|
| 2017
|
Guidelines for Genome-Scale Analysis of Biological Rhythms.
Journal of Biological Rhythms.
32:380-393.
2017
|
|
| 2017
|
Multicenter epidemiological investigation of hospitalized elderly, young and middle-aged patients with severe burn
2017
|
|
| 2017
|
Integrative Approaches to Understanding the Pathogenic Role of Genetic Variation in Rheumatic Diseases.
Rheumatic Disease Clinics of North America.
43:449-466.
2017
|
|
| 2017
|
A filtration-based method of preparing high-quality nuclei from cross-linked skeletal muscle for chromatin immunoprecipitation.
Journal of Visualized Experiments.
2017.
2017
|
|
| 2017
|
Suppression of ghrelin exacerbates HFCS-induced adiposity and insulin resistance.
International Journal of Molecular Sciences.
18.
2017
|
|
| 2017
|
Clock-enhancing small molecules and potential applications in chronic diseases and aging.
Frontiers in Neurology.
8.
2017
|
|
| 2017
|
HAPPI-2: A Comprehensive and High-quality Map of Human Annotated and Predicted Protein Interactions.
BMC Genomics.
18.
2017
|
|
| 2017
|
Bone tissue regeneration - Application of mesenchymal stem cells and cellular and molecular mechanisms.
Current Stem Cell Research and Therapy.
12:357-364.
2017
|
|
| 2017
|
Cellular signaling pathways in insulin resistance-systems biology analyses of microarray dataset reveals new drug target gene signatures of type 2 diabetes mellitus.
Frontiers in Physiology.
8.
2017
|
|
| 2017
|
Exercise-induced irisin in bone and systemic irisin administration reveal new regulatory mechanisms of bone metabolism.
Bone Research.
5.
2017
|
|
| 2017
|
High performance MgO-barrier magnetic tunnel junctions for flexible and wearable spintronic applications.
Scientific Reports.
7.
2017
|
|
| 2017
|
Repositioning drugs by targeting network modules: a Parkinson's disease case study.
2017
|
|
| 2017
|
Runx2/DICER/miRNA Pathway in Regulating Osteogenesis.
Journal of Cellular Physiology.
232:182-191.
2017
|
|
| 2016
|
Multicenter epidemiological investigation of hospitalized children with severe burn
2016
|
|
| 2016
|
Laser-initiated magnetization reversal and correlated morphological effects visualized with in situ Fresnel transmission electron microscopy.
Physical Review B.
94.
2016
|
|
| 2016
|
A method for identifying discriminative isoform-specific peptides for clinical proteomics application.
BMC Genomics.
17.
2016
|
|
| 2016
|
Pacemaker-neuron-dependent disturbance of the molecular clockwork by a Drosophila CLOCK mutant homologous to the mouse Clock mutation
2016
|
|
| 2016
|
Proteomic Characterization Reveals That MMP-3 Correlates With Bronchiolitis Obliterans Syndrome Following Allogeneic Hematopoietic Cell and Lung Transplantation.
American Journal of Transplantation.
16:2342-2351.
2016
|
|
| 2016
|
Time-Resolved Magneto-Optical Kerr Effect of Magnetic Thin Films for Ultrafast Thermal Characterization.
Journal of Physical Chemistry Letters.
7:2328-2332.
2016
|
|
| 2016
|
Molecular targets for small-molecule modulators of Circadian clocks.
Current Drug Metabolism.
17:503-512.
2016
|
|
| 2016
|
Epigenetic Modulation in Periodontitis: Interaction of Adiponectin and JMJD3-IRF4 Axis in Macrophages.
Journal of Cellular Physiology.
231:1090-1096.
2016
|
|
| 2016
|
The Small Molecule Nobiletin Targets the Molecular Oscillator to Enhance Circadian Rhythms and Protect against Metabolic Syndrome.
Cell Metabolism.
23:610-621.
2016
|
|
| 2015
|
A method for developing regulatory gene set networks to characterize complex biological systems.
BMC Genomics.
16.
2015
|
|
| 2015
|
DMAP: A connectivity map database to enable identification of novel drug repositioning candidates.
BMC Bioinformatics.
16.
2015
|
|
| 2015
|
All-optical switching of magnetoresistive devices using telecom-band femtosecond laser.
Applied Physics Letters.
107.
2015
|
|
| 2015
|
MicroRNA expression profiling of human respiratory epithelium affected by invasive candida infection.
PLoS ONE.
10.
2015
|
|
| 2015
|
Adenoviral vector-mediated overexpression of osteoprotegerin accelerates osteointegration of titanium implants in ovariectomized rats
2015
|
|
| 2015
|
Epigenetically Modified Bone Marrow Stromal Cells in Silk Scaffolds Promote Craniofacial Bone Repair and Wound Healing
2015
|
|
| 2015
|
Dual attenuation of proteasomal and autophagic BMAL1 degradation in Clock δ "19/+ mice contributes to improved glucose homeostasis.
Scientific Reports.
5.
2015
|
|
| 2015
|
Knowledge Discovery Using Big Data in Biomedical Systems.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
12:726-728.
2015
|
|
| 2015
|
PAGER: Constructing PAGs and new PAG-PAG relationships for network biology.
Bioinformatics.
31:i250-i257.
2015
|
|
| 2015
|
Ammonia-lowering activities and carbamoyl phosphate synthetase 1 (Cps1) induction mechanism of a natural flavonoid
2015
|
|
| 2015
|
Transmissible microbial and metabolomic remodeling by soluble dietary fiber improves metabolic homeostasis.
Scientific Reports.
5.
2015
|
|
| 2015
|
Adiponectin regulates bone marrow mesenchymal stem cell niche through a unique signal transduction pathway: An approach for treating bone disease in diabetes.
STEM CELLS.
33:240-252.
2015
|
|
| 2015
|
Circadian gene expression predicts patient response to neoadjuvant chemoradiation therapy for rectal cancer.
International Journal of Clinical and Experimental Pathology.
8:10985-10994.
2015
|
|
| 2015
|
Manipulating the circadian and sleep cycles to protect against metabolic disease.
Frontiers in Endocrinology.
6.
2015
|
|
| 2015
|
Response to letter to the editor, BET inhibitor JQ1 blocks inflammation and bone destruction.
Journal of Dental Research.
94:230.
2015
|
|
| 2014
|
Pathway and network analysis in proteomics.
Journal of Theoretical Biology.
362:44-52.
2014
|
|
| 2014
|
Transcriptional program of Kpna2/Importin-α2 regulates cellular differentiation-coupled circadian clock development in mammalian cells
2014
|
|
| 2014
|
SLDR: A computational technique to identify novel genetic regulatory relationships.
BMC Bioinformatics.
15.
2014
|
|
| 2014
|
Central adiponectin administration reveals new regulatory mechanisms of bone metabolism in mice
2014
|
|
| 2014
|
Adiponectin ameliorates experimental periodontitis in diet-induced obesity mice.
PLoS ONE.
9.
2014
|
|
| 2014
|
MicroRNA expression signature for Satb2-induced osteogenic differentiation in bone marrow stromal cells
2014
|
|
| 2014
|
BET inhibitor JQ1 blocks inflammation and bone destruction.
Journal of Dental Research.
93:657-662.
2014
|
|
| 2014
|
China's balancing act.
Science.
346:1194.
2014
|
|
| 2014
|
Prioritizing drug targets in Clostridium botulinum with a computational systems biology approach.
Genomics.
104:24-35.
2014
|
|
| 2014
|
Seed-weighted random walk ranking for cancer biomarker prioritisation: A case study in leukaemia.
International Journal of Data Mining and Bioinformatics.
9:135-148.
2014
|
|
| 2013
|
Transcription factor and bone marrow stromal cells in osseointegration of dental implants
2013
|
|
| 2013
|
Network medicine: Finding the links to personalized therapy.
Clinical Pharmacology and Therapeutics.
94:613-616.
2013
|
|
| 2013
|
Transcriptome network analysis of potential candidate genes for heart failure
2013
|
|
| 2013
|
Small molecule modifiers of circadian clocks.
Cellular and Molecular Life Sciences.
70:2985-2998.
2013
|
|
| 2013
|
Association of CD14-260 polymorphisms, red-complex periodontopathogens and gingival crevicular fluid cytokine levels with cyclosporine A-induced gingival overgrowth in renal transplant patients.
Journal of Periodontal Research.
48:203-212.
2013
|
|
| 2013
|
Competing E3 ubiquitin ligases govern circadian periodicity by degradation of CRY in nucleus and cytoplasm.
Cell.
152:1091-1105.
2013
|
|
| 2013
|
Predicting adverse drug reaction profiles by integrating protein interaction networks with drug structures.
Proteomics.
13:313-324.
2013
|
|
| 2012
|
Genome-wide meta-analysis of genetic susceptible genes for Type 2 Diabetes.
BMC Systems Biology.
6.
2012
|
|
| 2012
|
Towards a metadata model for mass-spectrometry based clinical proteomics
2012
|
|
| 2012
|
PAGED: A pathway and gene-set enrichment database to enable molecular phenotype discoveries.
BMC Bioinformatics.
13.
2012
|
|
| 2012
|
Network Expansion and Pathway Enrichment Analysis towards Biologically Significant Findings from Microarrays..
Journal of Integrative Bioinformatics.
9:113-125.
2012
|
|
| 2012
|
Sustained release of adiponectin improves osteogenesis around hydroxyapatite implants by suppressing osteoclast activity in ovariectomized rabbits.
Acta Biomaterialia.
8:734-743.
2012
|
|
| 2012
|
Identification of diverse modulators of central and peripheral circadian clocks by high-throughput chemical screening
2012
|
|
| 2012
|
Biological knowledge discovery and data mining
2012
|
|
| 2012
|
C²Maps: a network pharmacology database with comprehensive disease-gene-drug connectivity relationships..
BMC Genomics.
13 Suppl 6:S17.
2012
|
|
| 2012
|
Network expansion and pathway enrichment analysis towards biologically significant findings from microarrays..
Journal of Integrative Bioinformatics.
9:213.
2012
|
|
| 2012
|
Reordering based integrative expression profiling for microarray classification..
BMC Bioinformatics.
13 Suppl 2.
2012
|
|
| 2011
|
An integrated proteomics analysis of bone tissues in response to mechanical stimulation.
BMC Systems Biology.
5.
2011
|
|
| 2011
|
Predicting adverse side effects of drugs.
BMC Genomics.
12.
2011
|
|
| 2011
|
The use of injectable sonication-induced silk hydrogel for VEGF 165 and BMP-2 delivery for elevation of the maxillary sinus floor.
Biomaterials.
32:9415-9424.
2011
|
|
| 2011
|
Enhanced osseointegration of titanium implant through the local delivery of transcription factor SATB2.
Biomaterials.
32:8676-8683.
2011
|
|
| 2011
|
HOMER: A human organ-specific molecular electronic repository.
BMC Bioinformatics.
12.
2011
|
|
| 2011
|
Erratum: Tumor necrosis factor-α- and interleukin-1-induced cellular responses: Coupling proteomic and genomic information (Journal of Proteome Research (2007) 6 (2176-2185) DOI: 10.1021/pr060665l).
Journal of Proteome Research.
10:4886.
2011
|
|
| 2011
|
Critical-size calvarial bone defects healing in a mouse model with silk scaffolds and SATB2-modified iPSCs.
Biomaterials.
32:5065-5076.
2011
|
|
| 2011
|
Effects of miR-335-5p in modulating osteogenic differentiation by specifically downregulating Wnt antagonist DKK1.
Journal of Bone and Mineral Research.
26:1953-1963.
2011
|
|
| 2011
|
Roles of SATB2 in osteogenic differentiation and bone regeneration
2011
|
|
| 2011
|
Data mining methods in Omics-based biomarker discovery..
Methods in Molecular Biology.
719:511-526.
2011
|
|
| 2011
|
Adiponectin inhibits osteoclastogenesis and bone resorption via APPL1-mediated suppression of Akt1.
Journal of Biological Chemistry.
286:12542-12553.
2011
|
|
| 2011
|
Disease phenotypes and gender association of FCRL3 single-nucleotide polymorphism -169T/C in Taiwanese patients with systemic lupus erythematosus and rheumatoid arthritis.
Journal of Rheumatology.
38:264-270.
2011
|
|
| 2011
|
Application of induced pluripotent stem (iPS) cells in periodontal tissue regeneration.
Journal of Cellular Physiology.
226:150-157.
2011
|
|
| 2011
|
New threats to health data privacy..
BMC Bioinformatics.
12 Suppl 12.
2011
|
|
| 2010
|
A new approach to construct pathway connected networks and its application in dose responsive gene expression profiles of rat liver regulated by 2,4DNT.
BMC Genomics.
11.
2010
|
|
| 2010
|
Impact of sildenafil therapy on pulmonary arterial hypertension in adults with congenital heart disease
2010
|
|
| 2010
|
Discovery of pathway biomarkers from coupled proteomics and systems biology methods.
BMC Genomics.
11.
2010
|
|
| 2010
|
PEPPI: A peptidomic database of human protein isoforms for proteomics experiments.
BMC Bioinformatics.
11.
2010
|
|
| 2010
|
PEPPI: a peptidomic database of human protein isoforms for proteomics experiments..
BMC Bioinformatics.
11 Suppl 6:S7.
2010
|
|
| 2010
|
Data mining in bioinformatics: Selected papers from BIOKDD.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
7:195-196.
2010
|
|
| 2010
|
[The use of kidney-shaped pressure bandage to prevent postoperative salivary fistula]..
Shanghai kou qiang yi xue = Shanghai journal of stomatology.
19:144-146.
2010
|
|
| 2010
|
GeneTerrain: Visual exploration of differential gene expression profiles organized in native biomolecular interaction networks
2010
|
|
| 2010
|
A GMM-IG framework for selecting genes as expression panel biomarkers.
Artificial Intelligence in Medicine.
48:75-82.
2010
|
|
| 2010
|
MG-132 Inhibits Carcinoid Growth and Alters the Neuroendocrine Phenotype.
Journal of Surgical Research.
158:15-19.
2010
|
|
| 2009
|
Longitudinal spin transfer to Λ and Λ̄ hyperons in polarized proton-proton collisions at s=200GeV
2009
|
|
| 2009
|
Osterix enhances BMSC-associated osseointegration of implants.
Journal of Dental Research.
88:1003-1007.
2009
|
|
| 2009
|
HPD: An online integrated human pathway database enabling systems biology studies.
BMC Bioinformatics.
10.
2009
|
|
| 2009
|
HPD: an online integrated human pathway database enabling systems biology studies..
BMC Bioinformatics.
10 Suppl 11:S5.
2009
|
|
| 2009
|
Apatite-coated silk fibroin scaffolds to healing mandibular border defects in canines.
BONE.
45:517-527.
2009
|
|
| 2009
|
Mandibular repair in rats with premineralized silk scaffolds and BMP-2-modified bMSCs.
Biomaterials.
30:4522-4532.
2009
|
|
| 2009
|
Design of an online physician-mediated personal health record system.
Studies in Computational Intelligence.
224:265-279.
2009
|
|
| 2009
|
HAPPI: An online database of comprehensive human annotated and predicted protein interactions.
BMC Genomics.
10.
2009
|
|
| 2009
|
Applications of transgenics in studies of bone sialoprotein.
Journal of Cellular Physiology.
220:30-34.
2009
|
|
| 2009
|
Building disease-specific drug-protein connectivity maps from molecular interaction networks and PubMed abstracts.
PLoS Computational Biology.
5.
2009
|
|
| 2009
|
Pattern discovery in breast cancer specific protein interaction network..
Summit on translational bioinformatics.
2009:1-5.
2009
|
|
| 2009
|
Connecting protein interaction data, mutations, and disease using bioinformatics..
Methods in Molecular Biology.
541:449-461.
2009
|
|
| 2009
|
Disease gene-fishing in molecular interaction networks: A case study in colorectal cancer.
Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009.
6416-6419.
2009
|
|
| 2009
|
Dissecting the human plasma proteome and inflammatory response biomarkers.
Proteomics.
9:470-484.
2009
|
|
| 2009
|
Finding fractal patterns in molecular interaction networks: A case study in Alzheimer's disease.
International Journal of Computational Biology and Drug Design.
2:340-352.
2009
|
|
| 2009
|
Network topological reordering revealing systemic patterns in yeast protein interaction networks.
Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009.
6954-6957.
2009
|
|
| 2009
|
Targeted overexpression of BSP in osteoclasts promotes bone metastasis of breast cancer cells.
Journal of Cellular Physiology.
218:135-145.
2009
|
|
| 2008
|
Corrigendum to "Silk implants for the healing of critical size bone defects" [Bone 37 (2005) 688-698] (DOI:10.1016/j.bone.2005.06.010).
BONE.
43:1122.
2008
|
|
| 2008
|
Overexpression of bone sialoprotein leads to an uncoupling of bone formation and bone resorption in mice.
Journal of Bone and Mineral Research.
23:1775-1788.
2008
|
|
| 2008
|
Haploinsufficiency of Runx2 results in bone formation decrease and different BSP expression pattern changes in two transgenic mouse models.
Journal of Cellular Physiology.
217:40-47.
2008
|
|
| 2008
|
ProteoLens: A visual analytic tool for multi-scale database-driven biological network data mining.
BMC Bioinformatics.
9.
2008
|
|
| 2008
|
Expression of Osterix in mechanical stress-induced osteogenic differentiation of periodontal ligament cells in vitro.
European Journal of Oral Sciences.
116:199-206.
2008
|
|
| 2008
|
Evidence for an overlapping role of CLOCK and NPAS2 transcription factors in liver circadian oscillators.
Molecular and Cellular Biology.
28:3070-3075.
2008
|
|
| 2008
|
HIP2: an online database of human plasma proteins from healthy individuals..
BMC Medical Genomics.
1:12.
2008
|
|
| 2008
|
Systemically transplanted bone marrow stromal cells contributing to bone tissue regeneration.
Journal of Cellular Physiology.
215:204-209.
2008
|
|
| 2008
|
Introduction.
Journal of Bioinformatics and Computational Biology.
6.
2008
|
|
| 2008
|
Phenotypic analysis of Dlx5 overexpression in post-natal bone.
Journal of Dental Research.
87:45-50.
2008
|
|
| 2007
|
A conserved DNA damage response pathway responsible for coupling the cell division cycle to the circadian and metabolic cycles.
Cell Cycle.
6:2906-2912.
2007
|
|
| 2007
|
Osterix overexpression in mesenchymal stem cells stimulates healing of critical-sized defects in murine calvarial bone
2007
|
|
| 2007
|
Restriction of DNA replication to the reductive phase of the metabolic cycle protects genome integrity.
Science.
316:1916-1919.
2007
|
|
| 2007
|
Cbfa1/Runx2-deficiency delays bone wound healing and locally delivered Cbfa1/Runx2 promotes bone repair in animal models.
Wound Repair and Regeneration.
15:404-412.
2007
|
|
| 2007
|
A systems biology approach to the study of cisplatin drug resistance in ovarian cancers..
Journal of Bioinformatics and Computational Biology.
5:383-405.
2007
|
|
| 2007
|
Effects of platelet concentrate on palatal wound healing after connective tissue graft harvesting.
Journal of Periodontology.
78:601-610.
2007
|
|
| 2007
|
A case study of integrating protein interaction data using semantic web technology.
International Journal of Bioinformatics Research and Applications.
3:286-302.
2007
|
|
| 2007
|
DisProt: The database of disordered proteins.
Nucleic Acids Research.
35.
2007
|
|
| 2007
|
International Journal of Bioinformatics Research and Applications: Editorial.
International Journal of Bioinformatics Research and Applications.
3:261-267.
2007
|
|
| 2007
|
Tumor necrosis factor-α- and interleukin-1-induced cellular responses: Coupling proteomic and genomic information.
Journal of Proteome Research.
6:2176-2185.
2007
|
|
| 2006
|
Disorder and sequence repeats in hub proteins and their implications for network evolution.
Journal of Proteome Research.
5:2985-2995.
2006
|
|
| 2006
|
A statistical framework to discover true associations from multiprotein complex pull-down proteomics data sets
2006
|
|
| 2006
|
Porous silk fibroin 3-D scaffolds for delivery of bone morphogenetic protein-2 in vitro and in vivo
2006
|
|
| 2006
|
Osterix enhances proliferation and osteogenic potential of bone marrow stromal cells.
Biochemical and Biophysical Research Communications.
341:1257-1265.
2006
|
|
| 2006
|
Cloning of hamster osteopontin and expression distribution in normal tissues and experimentally induced oral squamous-cell carcinoma.
Archives of Oral Biology.
51:236-245.
2006
|
|
| 2006
|
A systems biology case study of ovarian cancer drug resistance..
Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference.
389-398.
2006
|
|
| 2005
|
An in vivo model to study osteogenic gene regulation: Targeting an avian retroviral receptor (TV A) to bone with the bone sialoprotein (BSP) promoter.
Journal of Bone and Mineral Research.
20:1403-1413.
2005
|
|
| 2005
|
Tissue- and bone cell-specific expression of bone sialoprotein is directed by a 9.0 kb promoter in transgenic mice
2005
|
|
| 2005
|
Data mining in protein interactomics
2005
|
|
| 2004
|
Bone sialoprotein promotes bone metastasis of a non-bone-seeking clone of human breast cancer cells
2004
|
|
| 2004
|
Autoregulation of bone sialoprotein gene in pre-osteoblastic and non-osteoblastic cells.
Biochemical and Biophysical Research Communications.
316:461-467.
2004
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|
| |
Polar Gini Curve: a Technique to Discover Single-cell Biomarker Using 2D Visual Information
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